Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881786.1_cds_XP_016437888.1_33607
CDS Infomation

[gene=LOC107763893] [db_xref=GeneID:107763893] [protein=protein TIC 100] [protein_id=XP_016437888.1] [location=join(22364..22983,25185..25256,25380..25469,25559..25732,26084..26174,27734..27796,27872..27938,27973..28076,28152..28278,29116..29858,30262..30579)] [gbkey=CDS]
Sequence

ATGGCGGACCCAGACGAAACCAACTTAAACAGTTCTCCCAATCCAGAAGAGGAGAACGAT
GAAGAAGAAGAAGAAGAAGAAGTAGAACTCGATGAACCCACTTCCTCAGACTCAGACTCG
GACTCGGAGTCCGAAACGGGGCTCCTACCATACACCCGGGCCGGGGGCGAACCCGACACA
GACGACGAAGAAAACAACACACCCGAAGCAAATGTGAAGCGTTTCATGCGAGTCCTCAAC
TCCAAACGCAGAAAGCGTGAGCTAGAAGAGGAAGCAGAAGAATACACTTATCACGAGGAC
TTGTTTGACTTTCCGTACGACCCTGAAAATTGGAGGGAAGAGGATTTAAAGGAGCTTTGG
GGGGATGCTCCGATTGAAATGACTAAACCCGGTTGGGACCCGAATTGGGTTGATGAAGAA
GAAGAGGATATTATTAGTGAAGAAACTAGAGCGGGTCGGGACCCTCCTATTGCCCCGTTT
TATGTTCCTTATAGGAAACCGTTCCCTGTGGTGCCGGATAATAACTATGATATTTCGAAC
CCGAAATCTGTGATTGAAGAGCTTGATAGGATTGAAGAGTTCTTGAAATGGGTTAGCTAC
ATTTTTGCTGATGGTAGCTCGTATGAAGGCACTGTTTGGGACGATTTGGCACATGGAAAA
GGTGTTTATGTTGCTGAGCAAGGGCTGGTCAGGTATGAAGGTGAATGGCTTCAAAACAAC
ATGGAAGGTCATGGAGTTGTTGAGGTTGAGATACCCCACATTGAACCCGTTCCAGGATCC
AAGCTTGAAGCCAAGATGAGAGCCGAAGGCAAGATAATAAAGAGAGACTTCATGTCCCCA
GAAGACAGAGAATGGCTGGAGAAGGATATTGAAGATACCATGGAGCTAACAAGCGGAGAA
TATGAAATCCCATTCTATGAGAATGGTGAATGGGTCAGGCAATTTGGAAAGAAACCGGAG
AAGGGGCGATATCGCTATGCTGGCCAATGGAAGCATGGGAGAATGCACGGTTGTGGTTTA
TATGAAGTTAATGAACGCACAATTTATGGTCGTTTTTATTTTGGAGAACTTGTGAGGGAT
ACTTATGGATGTGATGCAGAAATTTCGGCGATGCATGCAGGTATAGCTGAAGTTGCAGCT
GCTAAGGCTCGGATGTTTGTTAACAAGCCTGATGGAATGGTGAGAGAAGAGAGAGGTCCC
TATAGTGATCCTCAGCATCCATATTTATATGAAGAAGATGATGTGTGGATGGCACCAGGA
TTCATCAACCAGTTTTATGAAGTTCCTGATTATTGGAAAGCATATGTGCATGATGTGGAT
GAAGAGAGAGAAATGTGGTTGAACTCATTTTACAAAGCTCCTCTGCGATTACCTATGCCT
GCAGAGCTTGAATATTGGTGGTCTAAAGATCAAAAGCCAGAATTTATTCTACTTAACAAG
GAACCGGAGCCTGATCCTGAAGATCCTTCTAAACTTGTATATACCGAAGATCCGGTCATC
CTGCACACTCCAACTGGAAGGATTATCAACTATGTGGAAGACGAGGAACATGGGGTACGA
TTGTTTTGGCAACCTCTTGTAAAAGAGGGTGAAGATGTTGATCCTGATAAGGTTGAATTC
CTTCCCCTCGGATTTGACGAGTTTTATGGGCGAGGTGGGGCTGTCCAATCAGATAACATG
TGGAAGCGGTTTGTTACCTCTATGGAAAATGCATGCAAACCAATGTTTGAGAAGCTGGAG
AAATGGGCTGAAGAGAAAAAGAAAGCAGGTGAGATGAAGATAGAGCTCTTGAAGAAAGAG
TTTGAATTAGCAGAAGCAGAATTGTCTCTGAAGGAGGCAATGGAAGACATGGATGACGAA
TTAAAGAGAATGCAAGAAGAGGAGGAAAAGAAAGTTGAAATGGGAATCCAAGAAGAGGAT
GATATAGTGCCTTCTGAACCAACAGATAACGTTGAGAAAACGTGGGCGGAAAAGAAGGAA
GATGAGGAGGAAGAAGAGGAGGAGGACGACGAAGAGGAGGTTACTGCATCAAGTTTCGGG
TCTGTTGACAATCAAAGCGCAGCTAAAAGTGACAAGAAGGATAGCAAAACCGGAAAGGCT
CCATTTGGAGCATCTTCTTTGTCCTTTGCCGCCTGTAGCCTGGTTTCCACTGTGCCATCT
AATTTACTGCATACATTTACGGCTTGGAGGGAGGGAAAGTTGAGGCCAAAGCCGTCTCCA
TTGTTCACTCCATCTAGTATTCATGAATTTCCGAAGGAGCAAGAAACTCCAGGCTCAATT
AGCTTCCCTTATGCTGTTAGCAAAAATGGAAGATTAAGAGCTGTGCGTCAAGCACAGTGG
CCAGAGAAGTACATCAGCAAGTCGTGTATCAGAAGCCACTCAAAGCAGAAAGCATCTTCA
CAAATCCAAAGATACCAAGAAGACCAATGCTTCAACATATTATCATTGCACACACCATTA
CCTTTGTAG

Peptide Sequence

PEP ID

XP_016437888.1
PEP Infomation

PREDICTED: protein TIC 100 [Nicotiana tabacum]
Sequence

MADPDETNLNSSPNPEEENDEEEEEEEVELDEPTSSDSDSDSESETGLLPYTRAGGEPDT
DDEENNTPEANVKRFMRVLNSKRRKRELEEEAEEYTYHEDLFDFPYDPENWREEDLKELW
GDAPIEMTKPGWDPNWVDEEEEDIISEETRAGRDPPIAPFYVPYRKPFPVVPDNNYDISN
PKSVIEELDRIEEFLKWVSYIFADGSSYEGTVWDDLAHGKGVYVAEQGLVRYEGEWLQNN
MEGHGVVEVEIPHIEPVPGSKLEAKMRAEGKIIKRDFMSPEDREWLEKDIEDTMELTSGE
YEIPFYENGEWVRQFGKKPEKGRYRYAGQWKHGRMHGCGLYEVNERTIYGRFYFGELVRD
TYGCDAEISAMHAGIAEVAAAKARMFVNKPDGMVREERGPYSDPQHPYLYEEDDVWMAPG
FINQFYEVPDYWKAYVHDVDEEREMWLNSFYKAPLRLPMPAELEYWWSKDQKPEFILLNK
EPEPDPEDPSKLVYTEDPVILHTPTGRIINYVEDEEHGVRLFWQPLVKEGEDVDPDKVEF
LPLGFDEFYGRGGAVQSDNMWKRFVTSMENACKPMFEKLEKWAEEKKKAGEMKIELLKKE
FELAEAELSLKEAMEDMDDELKRMQEEEEKKVEMGIQEEDDIVPSEPTDNVEKTWAEKKE
DEEEEEEEDDEEEVTASSFGSVDNQSAAKSDKKDSKTGKAPFGASSLSFAACSLVSTVPS
NLLHTFTAWREGKLRPKPSPLFTPSSIHEFPKEQETPGSISFPYAVSKNGRLRAVRQAQW
PEKYISKSCIRSHSKQKASSQIQRYQEDQCFNILSLHTPLPL

Transcript Sequence

Gene sequence data has not been registered.